Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm15173-201ENSMUST00000122049 433 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm7230-201ENSMUST00000173026 815 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm6550-201ENSMUST00000187574 993 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm43347-201ENSMUST00000200226 580 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm9182-201ENSMUST00000217829 639 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3bQ80YF6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm6376-201ENSMUST00000209407 580 ntBASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk3bQ80YF6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms