Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Gm9726-201ENSMUST00000180321 678 ntBASIC13.75□□□□□ -0.21
Vrk1Q80X41 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Gm37230-201ENSMUST00000194491 818 ntBASIC13.75□□□□□ -0.21
Vrk1Q80X41 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.75□□□□□ -0.21
Vrk1Q80X41 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vrk1Q80X41 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.74□□□□□ -0.21
Vrk1Q80X41 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gm43438-201ENSMUST00000198133 379 ntBASIC13.74□□□□□ -0.21
Vrk1Q80X41 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gm9229-201ENSMUST00000222777 126 ntBASIC13.74□□□□□ -0.21
Vrk1Q80X41 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.74□□□□□ -0.21
Vrk1Q80X41 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.74□□□□□ -0.21
Vrk1Q80X41 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.73□□□□□ -0.21
Vrk1Q80X41 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.73□□□□□ -0.21
Vrk1Q80X41 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.73□□□□□ -0.21
Vrk1Q80X41 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vrk1Q80X41 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms