Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Dupd1-202ENSMUST00000224735 548 ntBASIC13.3□□□□□ -0.28
Pif1Q80SX8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Gm20445-201ENSMUST00000061905 565 ntBASIC13.3□□□□□ -0.28
Pif1Q80SX8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pif1Q80SX8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.29□□□□□ -0.28
Pif1Q80SX8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm3436-201ENSMUST00000179930 840 ntBASIC13.29□□□□□ -0.28
Pif1Q80SX8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm43703-201ENSMUST00000200523 763 ntBASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pif1Q80SX8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.28□□□□□ -0.28
Pif1Q80SX8 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.28□□□□□ -0.28
Pif1Q80SX8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pif1Q80SX8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pif1Q80SX8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.28□□□□□ -0.28
Pif1Q80SX8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms