Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Rtl1Q7M732 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
Rtl1Q7M732 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Gm37917-201ENSMUST00000194711 392 ntBASIC25.32■■□□□ 1.64
Rtl1Q7M732 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Gm17795-201ENSMUST00000214505 757 ntBASIC25.32■■□□□ 1.64
Rtl1Q7M732 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 AC154846.1-201ENSMUST00000226278 862 ntBASIC25.32■■□□□ 1.64
Rtl1Q7M732 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Gm15823-201ENSMUST00000064305 670 ntBASIC25.32■■□□□ 1.64
Rtl1Q7M732 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Rtl1Q7M732 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC25.32■■□□□ 1.64
Rtl1Q7M732 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC25.32■■□□□ 1.64
Rtl1Q7M732 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtl1Q7M732 Gm43697-201ENSMUST00000199637 2581 ntBASIC25.31■■□□□ 1.64
Rtl1Q7M732 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 AC168058.1-201ENSMUST00000219521 2282 ntBASIC25.31■■□□□ 1.64
Rtl1Q7M732 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Gm26464-201ENSMUST00000157094 305 ntBASIC25.31■■□□□ 1.64
Rtl1Q7M732 Gm21470-201ENSMUST00000187680 696 ntBASIC25.31■■□□□ 1.64
Rtl1Q7M732 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtl1Q7M732 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Gm14928-201ENSMUST00000120198 477 ntBASIC25.3■■□□□ 1.64
Rtl1Q7M732 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC25.3■■□□□ 1.64
Rtl1Q7M732 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Gm15889-202ENSMUST00000212669 2443 ntBASIC25.3■■□□□ 1.64
Rtl1Q7M732 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtl1Q7M732 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Gm11524-201ENSMUST00000119349 807 ntBASIC25.29■■□□□ 1.64
Rtl1Q7M732 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 AC154527.2-201ENSMUST00000225256 1466 ntBASIC25.29■■□□□ 1.64
Rtl1Q7M732 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC25.29■■□□□ 1.64
Rtl1Q7M732 Ighv1-51-201ENSMUST00000192903 354 ntBASIC25.29■■□□□ 1.64
Rtl1Q7M732 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms