Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ddx55Q6ZPL9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Gm17420-201ENSMUST00000164753 153 ntBASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Gm6091-201ENSMUST00000098307 165 ntBASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ddx55Q6ZPL9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx55Q6ZPL9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx55Q6ZPL9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ddx55Q6ZPL9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.27■□□□□ 0.19
Ddx55Q6ZPL9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx55Q6ZPL9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ddx55Q6ZPL9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gm26464-201ENSMUST00000157094 305 ntBASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gm29127-201ENSMUST00000188304 517 ntBASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gm18027-201ENSMUST00000218947 619 ntBASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ddx55Q6ZPL9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gm27847-201ENSMUST00000183711 107 ntBASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gm27375-201ENSMUST00000183799 107 ntBASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gm27731-201ENSMUST00000185192 107 ntBASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ddx55Q6ZPL9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ddx55Q6ZPL9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms