Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gm16476-201ENSMUST00000221544 139 ntBASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd1Q6PIP5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd1Q6PIP5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Gm14719-201ENSMUST00000121891 340 ntBASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Gm27838-201ENSMUST00000184829 128 ntBASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Shd-206ENSMUST00000225145 998 ntBASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd1Q6PIP5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Gm27631-201ENSMUST00000184163 466 ntBASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Gm45453-201ENSMUST00000211758 853 ntBASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Dupd1-202ENSMUST00000224735 548 ntBASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd1Q6PIP5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms