Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Gm8584-201ENSMUST00000171982 758 ntBASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scaf4Q6PFF0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf4Q6PFF0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Gm15173-201ENSMUST00000122049 433 ntBASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf4Q6PFF0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf4Q6PFF0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scaf4Q6PFF0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms