Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sik3Q6P4S6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Gm21854-201ENSMUST00000179901 471 ntBASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Gm10766-202ENSMUST00000194123 606 ntBASIC17.1■□□□□ 0.33
Sik3Q6P4S6 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Gm9797-201ENSMUST00000052902 613 ntBASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sik3Q6P4S6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sik3Q6P4S6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Sik3Q6P4S6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sik3Q6P4S6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sik3Q6P4S6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sik3Q6P4S6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.08■□□□□ 0.33
Sik3Q6P4S6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Gm12134-201ENSMUST00000122109 520 ntBASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Gm8602-201ENSMUST00000184045 607 ntBASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Gm28760-201ENSMUST00000185995 736 ntBASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Mir125a-201ENSMUST00000083545 68 ntBASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sik3Q6P4S6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sik3Q6P4S6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sik3Q6P4S6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sik3Q6P4S6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sik3Q6P4S6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sik3Q6P4S6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sik3Q6P4S6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms