Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ndufa4Q62425 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa4Q62425 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ndufa4Q62425 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.42□□□□□ -0.74
Ndufa4Q62425 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.42□□□□□ -0.74
Ndufa4Q62425 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.42□□□□□ -0.74
Ndufa4Q62425 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ndufa4Q62425 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.41□□□□□ -0.74
Ndufa4Q62425 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm13464-201ENSMUST00000119418 935 ntBASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm13836-201ENSMUST00000121159 501 ntBASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.41□□□□□ -0.74
Ndufa4Q62425 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.41□□□□□ -0.74
Ndufa4Q62425 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ndufa4Q62425 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ndufa4Q62425 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms