Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
VcanQ62059 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
VcanQ62059 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Gm25732-201ENSMUST00000175168 60 ntBASIC13.26□□□□□ -0.29
VcanQ62059 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.26□□□□□ -0.29
VcanQ62059 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.26□□□□□ -0.29
VcanQ62059 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.26□□□□□ -0.29
VcanQ62059 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.26□□□□□ -0.29
VcanQ62059 Gm7467-201ENSMUST00000185173 652 ntBASIC13.26□□□□□ -0.29
VcanQ62059 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.26□□□□□ -0.29
VcanQ62059 Gm5425-201ENSMUST00000214125 459 ntBASIC13.26□□□□□ -0.29
VcanQ62059 Gm10752-201ENSMUST00000218348 729 ntBASIC13.26□□□□□ -0.29
VcanQ62059 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.26□□□□□ -0.29
VcanQ62059 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcanQ62059 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Gm44126-201ENSMUST00000204831 514 ntBASIC13.25□□□□□ -0.29
VcanQ62059 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.25□□□□□ -0.29
VcanQ62059 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.25□□□□□ -0.29
VcanQ62059 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
VcanQ62059 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Gm6023-201ENSMUST00000118217 606 ntBASIC13.25□□□□□ -0.29
VcanQ62059 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Gm17795-201ENSMUST00000214505 757 ntBASIC13.25□□□□□ -0.29
VcanQ62059 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.25□□□□□ -0.29
VcanQ62059 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.25□□□□□ -0.29
VcanQ62059 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
VcanQ62059 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcanQ62059 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.24□□□□□ -0.29
VcanQ62059 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.24□□□□□ -0.29
VcanQ62059 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Gm15460-201ENSMUST00000118147 391 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm3508-201ENSMUST00000186012 792 ntBASIC13.24□□□□□ -0.29
VcanQ62059 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm42997-202ENSMUST00000200321 985 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.24□□□□□ -0.29
VcanQ62059 Gm5051-201ENSMUST00000204085 485 ntBASIC13.24□□□□□ -0.29
VcanQ62059 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.24□□□□□ -0.29
VcanQ62059 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VcanQ62059 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.24□□□□□ -0.29
VcanQ62059 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.24□□□□□ -0.29
VcanQ62059 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcanQ62059 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VcanQ62059 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VcanQ62059 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VcanQ62059 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.23□□□□□ -0.29
VcanQ62059 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.23□□□□□ -0.29
VcanQ62059 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.23□□□□□ -0.29
VcanQ62059 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.23□□□□□ -0.29
VcanQ62059 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms