Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.67□□□□□ -0.7
Foxc1Q61572 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Gm8679-201ENSMUST00000210651 1036 ntBASIC10.67□□□□□ -0.7
Foxc1Q61572 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.67□□□□□ -0.7
Foxc1Q61572 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.67□□□□□ -0.7
Foxc1Q61572 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.67□□□□□ -0.7
Foxc1Q61572 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Foxc1Q61572 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.67□□□□□ -0.7
Foxc1Q61572 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm14057-201ENSMUST00000120631 482 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm15171-201ENSMUST00000122191 334 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm27494-201ENSMUST00000184735 189 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.66□□□□□ -0.7
Foxc1Q61572 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.66□□□□□ -0.7
Foxc1Q61572 AC102542.1-201ENSMUST00000225204 1138 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm10154-201ENSMUST00000084445 354 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.66□□□□□ -0.7
Foxc1Q61572 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.66□□□□□ -0.7
Foxc1Q61572 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Foxc1Q61572 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Foxc1Q61572 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
Foxc1Q61572 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Foxc1Q61572 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms