Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ecm1Q61508 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ecm1Q61508 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ecm1Q61508 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.83■□□□□ 0.13
Ecm1Q61508 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ecm1Q61508 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ecm1Q61508 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ecm1Q61508 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ecm1Q61508 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm43094-201ENSMUST00000196549 921 ntBASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm19078-201ENSMUST00000206311 727 ntBASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm8463-201ENSMUST00000208573 613 ntBASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.83■□□□□ 0.12
Ecm1Q61508 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.83■□□□□ 0.12
Ecm1Q61508 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.83■□□□□ 0.12
Ecm1Q61508 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.83■□□□□ 0.12
Ecm1Q61508 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ecm1Q61508 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Ecm1Q61508 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ecm1Q61508 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.82■□□□□ 0.12
Ecm1Q61508 Carlr-201ENSMUST00000181515 2574 ntBASIC15.82■□□□□ 0.12
Ecm1Q61508 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ecm1Q61508 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Gm11524-201ENSMUST00000119349 807 ntBASIC15.81■□□□□ 0.12
Ecm1Q61508 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.81■□□□□ 0.12
Ecm1Q61508 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.81■□□□□ 0.12
Ecm1Q61508 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.81■□□□□ 0.12
Ecm1Q61508 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.81■□□□□ 0.12
Ecm1Q61508 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Ecm1Q61508 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ecm1Q61508 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ecm1Q61508 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ecm1Q61508 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms