Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcd1Q61466 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.98□□□□□ -0.01
Smarcd1Q61466 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.98□□□□□ -0.01
Smarcd1Q61466 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.98□□□□□ -0.01
Smarcd1Q61466 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.98□□□□□ -0.01
Smarcd1Q61466 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcd1Q61466 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.97□□□□□ -0.01
Smarcd1Q61466 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.97□□□□□ -0.01
Smarcd1Q61466 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcd1Q61466 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Gm23547-201ENSMUST00000158210 271 ntBASIC14.96□□□□□ -0.01
Smarcd1Q61466 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Gm3436-201ENSMUST00000179930 840 ntBASIC14.96□□□□□ -0.01
Smarcd1Q61466 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Gm9229-201ENSMUST00000222777 126 ntBASIC14.96□□□□□ -0.01
Smarcd1Q61466 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcd1Q61466 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms