Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Gm37714-201ENSMUST00000194742 342 ntBASIC11.96□□□□□ -0.49
Hcfc1Q61191 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.96□□□□□ -0.49
Hcfc1Q61191 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.96□□□□□ -0.49
Hcfc1Q61191 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.96□□□□□ -0.49
Hcfc1Q61191 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Gm6091-201ENSMUST00000098307 165 ntBASIC11.96□□□□□ -0.49
Hcfc1Q61191 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hcfc1Q61191 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Hcfc1Q61191 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.95□□□□□ -0.5
Hcfc1Q61191 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.95□□□□□ -0.5
Hcfc1Q61191 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hcfc1Q61191 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hcfc1Q61191 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms