Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.93□□□□□ -0.18
Col12a1Q60847 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col12a1Q60847 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col12a1Q60847 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.92□□□□□ -0.18
Col12a1Q60847 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Gm12203-201ENSMUST00000118235 598 ntBASIC13.92□□□□□ -0.18
Col12a1Q60847 Gm12209-201ENSMUST00000120089 596 ntBASIC13.92□□□□□ -0.18
Col12a1Q60847 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Gm24990-201ENSMUST00000157406 323 ntBASIC13.92□□□□□ -0.18
Col12a1Q60847 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.92□□□□□ -0.18
Col12a1Q60847 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 Gm21769-201ENSMUST00000211922 111 ntBASIC13.92□□□□□ -0.18
Col12a1Q60847 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.92□□□□□ -0.18
Col12a1Q60847 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col12a1Q60847 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm27320-201ENSMUST00000184892 109 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Col12a1Q60847 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm37497-201ENSMUST00000195830 798 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.91□□□□□ -0.18
Col12a1Q60847 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.91□□□□□ -0.18
Col12a1Q60847 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col12a1Q60847 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col12a1Q60847 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Gm25927-201ENSMUST00000175058 117 ntBASIC13.9□□□□□ -0.18
Col12a1Q60847 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Efs-202ENSMUST00000227037 2540 ntBASIC13.9□□□□□ -0.18
Col12a1Q60847 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.9□□□□□ -0.18
Col12a1Q60847 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms