Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rnf20Q5DTM8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf20Q5DTM8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Gm11745-201ENSMUST00000121669 448 ntBASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf20Q5DTM8 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf20Q5DTM8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Gm38225-201ENSMUST00000194001 393 ntBASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf20Q5DTM8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.11■□□□□ 0.33
Rnf20Q5DTM8 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms