Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm1Q52KI8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm1Q52KI8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srrm1Q52KI8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Gm15393-201ENSMUST00000120499 219 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Gm5356-201ENSMUST00000093326 615 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srrm1Q52KI8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.1■□□□□ 0.17
Srrm1Q52KI8 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm12585-201ENSMUST00000117307 290 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm13392-201ENSMUST00000117708 150 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm5354-201ENSMUST00000182417 973 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.09■□□□□ 0.17
Srrm1Q52KI8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm1Q52KI8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Olfr286-202ENSMUST00000205305 969 ntBASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm1Q52KI8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms