Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx49Q4FZF3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Gm15678-201ENSMUST00000117573 960 ntBASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Gm8749-201ENSMUST00000117737 331 ntBASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx49Q4FZF3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Gm4984-201ENSMUST00000115987 360 ntBASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Gm27701-201ENSMUST00000184498 110 ntBASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Gm27892-201ENSMUST00000185017 106 ntBASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Gm28911-201ENSMUST00000188837 117 ntBASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Gm9182-201ENSMUST00000217829 639 ntBASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx49Q4FZF3 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.71■□□□□ 0.26
Ddx49Q4FZF3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx49Q4FZF3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx49Q4FZF3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx49Q4FZF3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx49Q4FZF3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Gm12585-201ENSMUST00000117307 290 ntBASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 AA619741-201ENSMUST00000195095 646 ntBASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Olfr286-202ENSMUST00000205305 969 ntBASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx49Q4FZF3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms