Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm16570-201ENSMUST00000161951 436 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Olfr284-202ENSMUST00000206647 966 ntBASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shank3Q4ACU6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Gm1335-201ENSMUST00000121653 386 ntBASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Gm43818-201ENSMUST00000200605 466 ntBASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shank3Q4ACU6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Gm4857-201ENSMUST00000192718 785 ntBASIC17.53■□□□□ 0.4
Shank3Q4ACU6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank3Q4ACU6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank3Q4ACU6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Gm5687-201ENSMUST00000118252 640 ntBASIC17.52■□□□□ 0.39
Shank3Q4ACU6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank3Q4ACU6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm15770-201ENSMUST00000117498 584 ntBASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank3Q4ACU6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms