Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm15808-201ENSMUST00000119046 604 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm11524-201ENSMUST00000119349 807 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm27516-201ENSMUST00000184237 98 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm43094-201ENSMUST00000196549 921 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm18905-201ENSMUST00000205454 928 ntBASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fam196aQ3USH1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.36□□□□□ -0.11
Fam196aQ3USH1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Gm44364-201ENSMUST00000198368 141 ntBASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.36□□□□□ -0.11
Fam196aQ3USH1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fam196aQ3USH1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Gm13612-201ENSMUST00000119276 390 ntBASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fam196aQ3USH1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fam196aQ3USH1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms