Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Fndc4Q3TR08 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Fndc4Q3TR08 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Gm15590-201ENSMUST00000078419 552 ntBASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Fndc4Q3TR08 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms