Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nhej1Q3KNJ2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm13597-201ENSMUST00000121239 375 ntBASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm17971-201ENSMUST00000190239 806 ntBASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm5864-201ENSMUST00000202263 970 ntBASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nhej1Q3KNJ2 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Gm16198-201ENSMUST00000118766 670 ntBASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nhej1Q3KNJ2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nhej1Q3KNJ2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nhej1Q3KNJ2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nhej1Q3KNJ2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.33■□□□□ 0.05
Nhej1Q3KNJ2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhej1Q3KNJ2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nhej1Q3KNJ2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nhej1Q3KNJ2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nhej1Q3KNJ2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.33■□□□□ 0.04
Nhej1Q3KNJ2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nhej1Q3KNJ2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms