Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.99□□□□□ -0.49
Tff1Q08423 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tff1Q08423 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Tff1Q08423 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tff1Q08423 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.98□□□□□ -0.49
Tff1Q08423 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tff1Q08423 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Gm4899-201ENSMUST00000178708 719 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Gm44872-201ENSMUST00000207864 420 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tff1Q08423 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.98□□□□□ -0.49
Tff1Q08423 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Tff1Q08423 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Tff1Q08423 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tff1Q08423 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.98□□□□□ -0.49
Tff1Q08423 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tff1Q08423 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tff1Q08423 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tff1Q08423 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Tff1Q08423 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.97□□□□□ -0.49
Tff1Q08423 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.97□□□□□ -0.49
Tff1Q08423 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tff1Q08423 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.97□□□□□ -0.49
Tff1Q08423 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Tff1Q08423 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tff1Q08423 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.97□□□□□ -0.49
Tff1Q08423 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.97□□□□□ -0.49
Tff1Q08423 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.97□□□□□ -0.49
Tff1Q08423 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.97□□□□□ -0.49
Tff1Q08423 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.97□□□□□ -0.49
Tff1Q08423 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tff1Q08423 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tff1Q08423 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.97□□□□□ -0.49
Tff1Q08423 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.97□□□□□ -0.49
Tff1Q08423 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tff1Q08423 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tff1Q08423 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms