Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 Gm6415-201ENSMUST00000118488 348 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 Gm14722-201ENSMUST00000118943 689 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.8□□□□□ -0.2
Atf4Q06507 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.8□□□□□ -0.2
Atf4Q06507 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
Atf4Q06507 Gm44387-201ENSMUST00000196298 145 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.8□□□□□ -0.2
Atf4Q06507 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 Gm10154-201ENSMUST00000084445 354 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.8□□□□□ -0.2
Atf4Q06507 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf4Q06507 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf4Q06507 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Grk6-207ENSMUST00000225925 2769 ntBASIC13.79□□□□□ -0.2
Atf4Q06507 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Atf4Q06507 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Gm2810-201ENSMUST00000118681 990 ntBASIC13.79□□□□□ -0.2
Atf4Q06507 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Atf4Q06507 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Atf4Q06507 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Atf4Q06507 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
Atf4Q06507 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf4Q06507 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Atf4Q06507 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Atf4Q06507 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Atf4Q06507 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Atf4Q06507 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.78□□□□□ -0.2
Atf4Q06507 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Atf4Q06507 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Atf4Q06507 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Atf4Q06507 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.78□□□□□ -0.2
Atf4Q06507 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.78□□□□□ -0.2
Atf4Q06507 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Atf4Q06507 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms