Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.65□□□□□ -0.39
Thbs3Q05895 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Thbs3Q05895 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Thbs3Q05895 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Thbs3Q05895 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Thbs3Q05895 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm22065-201ENSMUST00000103753 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm22066-201ENSMUST00000103761 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24932-201ENSMUST00000103763 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24115-201ENSMUST00000103799 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm22190-201ENSMUST00000103827 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm22191-201ENSMUST00000103831 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24721-201ENSMUST00000103849 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm28018-201ENSMUST00000103869 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm26399-201ENSMUST00000103937 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm26308-201ENSMUST00000157768 69 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24158-201ENSMUST00000175263 71 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm25349-201ENSMUST00000177728 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm23616-201ENSMUST00000177797 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm25871-201ENSMUST00000177816 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24752-201ENSMUST00000178240 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24496-201ENSMUST00000178287 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm25649-201ENSMUST00000178476 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm25548-201ENSMUST00000178681 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm23147-201ENSMUST00000178841 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm26095-201ENSMUST00000179270 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm22171-201ENSMUST00000179283 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm23936-201ENSMUST00000179354 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm22619-201ENSMUST00000179516 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm25255-201ENSMUST00000179579 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24755-201ENSMUST00000179691 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm26506-201ENSMUST00000179692 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm25086-201ENSMUST00000179931 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm23243-201ENSMUST00000180047 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24659-201ENSMUST00000180212 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm24169-201ENSMUST00000180244 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm23689-201ENSMUST00000180354 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm27359-201ENSMUST00000184153 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm27785-201ENSMUST00000184268 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm27466-201ENSMUST00000184396 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm27703-201ENSMUST00000184836 110 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm43575-201ENSMUST00000196420 516 ntBASIC12.63□□□□□ -0.39
Thbs3Q05895 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms