Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col6a2Q02788 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a2Q02788 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Gm12428-201ENSMUST00000119844 727 ntBASIC14.37□□□□□ -0.11
Col6a2Q02788 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Gm45453-201ENSMUST00000211758 853 ntBASIC14.37□□□□□ -0.11
Col6a2Q02788 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.37□□□□□ -0.11
Col6a2Q02788 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col6a2Q02788 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col6a2Q02788 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.36□□□□□ -0.11
Col6a2Q02788 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.36□□□□□ -0.11
Col6a2Q02788 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.36□□□□□ -0.11
Col6a2Q02788 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm46209-201ENSMUST00000217912 553 ntBASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm16476-201ENSMUST00000221544 139 ntBASIC14.36□□□□□ -0.11
Col6a2Q02788 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a2Q02788 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col6a2Q02788 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col6a2Q02788 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col6a2Q02788 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col6a2Q02788 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a2Q02788 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.35□□□□□ -0.11
Col6a2Q02788 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col6a2Q02788 Gm27680-201ENSMUST00000184192 160 ntBASIC14.35□□□□□ -0.11
Col6a2Q02788 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.35□□□□□ -0.11
Col6a2Q02788 Gm7775-201ENSMUST00000218871 853 ntBASIC14.35□□□□□ -0.11
Col6a2Q02788 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a2Q02788 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms