Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.3■□□□□ 0.2
GabpaQ00422 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.3■□□□□ 0.2
GabpaQ00422 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Gm15393-201ENSMUST00000120499 219 ntBASIC16.3■□□□□ 0.2
GabpaQ00422 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.3■□□□□ 0.2
GabpaQ00422 Gm28760-201ENSMUST00000185995 736 ntBASIC16.3■□□□□ 0.2
GabpaQ00422 Gm28631-201ENSMUST00000190740 334 ntBASIC16.3■□□□□ 0.2
GabpaQ00422 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.3■□□□□ 0.2
GabpaQ00422 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Gm45668-201ENSMUST00000211271 493 ntBASIC16.3■□□□□ 0.2
GabpaQ00422 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
GabpaQ00422 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GabpaQ00422 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GabpaQ00422 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GabpaQ00422 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
GabpaQ00422 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GabpaQ00422 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GabpaQ00422 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.29■□□□□ 0.2
GabpaQ00422 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.29■□□□□ 0.2
GabpaQ00422 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.29■□□□□ 0.2
GabpaQ00422 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GabpaQ00422 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.29■□□□□ 0.2
GabpaQ00422 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GabpaQ00422 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GabpaQ00422 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GabpaQ00422 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GabpaQ00422 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.28■□□□□ 0.2
GabpaQ00422 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GabpaQ00422 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GabpaQ00422 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
GabpaQ00422 Gm6912-201ENSMUST00000117218 544 ntBASIC16.28■□□□□ 0.2
GabpaQ00422 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.28■□□□□ 0.2
GabpaQ00422 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GabpaQ00422 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
GabpaQ00422 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.28■□□□□ 0.2
GabpaQ00422 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GabpaQ00422 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
GabpaQ00422 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GabpaQ00422 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GabpaQ00422 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.27■□□□□ 0.2
GabpaQ00422 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GabpaQ00422 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GabpaQ00422 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GabpaQ00422 Gm15823-201ENSMUST00000064305 670 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms