Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Thumpd3P97770 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.68□□□□□ -0.06
Thumpd3P97770 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.68□□□□□ -0.06
Thumpd3P97770 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thumpd3P97770 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.67□□□□□ -0.06
Thumpd3P97770 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.67□□□□□ -0.06
Thumpd3P97770 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Thumpd3P97770 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.67□□□□□ -0.06
Thumpd3P97770 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.67□□□□□ -0.06
Thumpd3P97770 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Gm17271-201ENSMUST00000165535 355 ntBASIC14.67□□□□□ -0.06
Thumpd3P97770 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.67□□□□□ -0.06
Thumpd3P97770 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.67□□□□□ -0.06
Thumpd3P97770 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.67□□□□□ -0.06
Thumpd3P97770 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.67□□□□□ -0.06
Thumpd3P97770 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thumpd3P97770 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Thumpd3P97770 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.66□□□□□ -0.06
Thumpd3P97770 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.66□□□□□ -0.06
Thumpd3P97770 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.66□□□□□ -0.06
Thumpd3P97770 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thumpd3P97770 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.65□□□□□ -0.06
Thumpd3P97770 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Thumpd3P97770 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.65□□□□□ -0.06
Thumpd3P97770 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Thumpd3P97770 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.65□□□□□ -0.06
Thumpd3P97770 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Thumpd3P97770 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms