Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43cP86449 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Gm12428-201ENSMUST00000119844 727 ntBASIC15.66■□□□□ 0.1
Trim43cP86449 Gm12882-201ENSMUST00000121696 517 ntBASIC15.66■□□□□ 0.1
Trim43cP86449 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Gm8396-201ENSMUST00000057361 823 ntBASIC15.66■□□□□ 0.1
Trim43cP86449 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43cP86449 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Trim43cP86449 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43cP86449 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim43cP86449 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 BC001981-202ENSMUST00000191393 1545 ntBASIC15.65■□□□□ 0.1
Trim43cP86449 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43cP86449 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim43cP86449 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim43cP86449 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim43cP86449 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43cP86449 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Gm15693-201ENSMUST00000120470 637 ntBASIC15.64■□□□□ 0.09
Trim43cP86449 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim43cP86449 Gm18049-201ENSMUST00000208909 581 ntBASIC15.64■□□□□ 0.09
Trim43cP86449 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim43cP86449 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.64■□□□□ 0.09
Trim43cP86449 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim43cP86449 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43cP86449 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43cP86449 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43cP86449 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim43cP86449 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim43cP86449 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trim43cP86449 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms