Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm21896-201ENSMUST00000186520 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21873-201ENSMUST00000186728 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21794-201ENSMUST00000187056 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21880-201ENSMUST00000187275 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21826-201ENSMUST00000187451 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21198-201ENSMUST00000188393 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21749-201ENSMUST00000189343 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21901-201ENSMUST00000189568 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm29424-201ENSMUST00000189716 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm28599-201ENSMUST00000189838 694 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21867-201ENSMUST00000189917 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm29269-201ENSMUST00000190087 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21722-201ENSMUST00000190153 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm28423-201ENSMUST00000190701 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21899-201ENSMUST00000190745 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21910-201ENSMUST00000191163 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21849-201ENSMUST00000191571 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm28678-201ENSMUST00000191593 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm20910-201ENSMUST00000193268 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Gm21871-201ENSMUST00000194621 696 ntBASIC12.82□□□□□ -0.36
H3f3aP84244 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.82□□□□□ -0.36
H3f3aP84244 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3aP84244 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3f3aP84244 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.82□□□□□ -0.36
H3f3aP84244 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3f3aP84244 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H3f3aP84244 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H3f3aP84244 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H3f3aP84244 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.81□□□□□ -0.36
H3f3aP84244 Gm13823-201ENSMUST00000119930 345 ntBASIC12.81□□□□□ -0.36
H3f3aP84244 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.81□□□□□ -0.36
H3f3aP84244 Gm18766-201ENSMUST00000189811 808 ntBASIC12.81□□□□□ -0.36
H3f3aP84244 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H3f3aP84244 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H3f3aP84244 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.81□□□□□ -0.36
H3f3aP84244 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
H3f3aP84244 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.81□□□□□ -0.36
H3f3aP84244 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H3f3aP84244 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3f3aP84244 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H3f3aP84244 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H3f3aP84244 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.8□□□□□ -0.36
H3f3aP84244 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.8□□□□□ -0.36
H3f3aP84244 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.8□□□□□ -0.36
H3f3aP84244 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
H3f3aP84244 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms