Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcaP82350 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SgcaP82350 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SgcaP82350 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SgcaP82350 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SgcaP82350 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
SgcaP82350 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.08□□□□□ -0.48
SgcaP82350 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcaP82350 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcaP82350 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SgcaP82350 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcaP82350 Gm29518-201ENSMUST00000190858 372 ntBASIC12.08□□□□□ -0.48
SgcaP82350 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SgcaP82350 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SgcaP82350 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SgcaP82350 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.08□□□□□ -0.48
SgcaP82350 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcaP82350 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
SgcaP82350 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.07□□□□□ -0.48
SgcaP82350 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SgcaP82350 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Gm27867-201ENSMUST00000184778 125 ntBASIC12.07□□□□□ -0.48
SgcaP82350 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcaP82350 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.06□□□□□ -0.48
SgcaP82350 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SgcaP82350 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
SgcaP82350 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcaP82350 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms