Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm24496-201ENSMUST00000178287 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm25649-201ENSMUST00000178476 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm25548-201ENSMUST00000178681 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm23147-201ENSMUST00000178841 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm26095-201ENSMUST00000179270 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm22171-201ENSMUST00000179283 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm23936-201ENSMUST00000179354 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm22619-201ENSMUST00000179516 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm25255-201ENSMUST00000179579 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm24755-201ENSMUST00000179691 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm26506-201ENSMUST00000179692 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm25086-201ENSMUST00000179931 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm23243-201ENSMUST00000180047 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm24659-201ENSMUST00000180212 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm24169-201ENSMUST00000180244 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm23689-201ENSMUST00000180354 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.48□□□□□ -0.25
Six5P70178 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.48□□□□□ -0.25
Six5P70178 Gm27359-201ENSMUST00000184153 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm27785-201ENSMUST00000184268 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm27466-201ENSMUST00000184396 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 Gm27703-201ENSMUST00000184836 110 ntBASIC13.48□□□□□ -0.25
Six5P70178 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.48□□□□□ -0.25
Six5P70178 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.48□□□□□ -0.25
Six5P70178 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.48□□□□□ -0.25
Six5P70178 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Six5P70178 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.48□□□□□ -0.25
Six5P70178 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six5P70178 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Six5P70178 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.47□□□□□ -0.25
Six5P70178 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Gm9824-201ENSMUST00000178707 561 ntBASIC13.47□□□□□ -0.25
Six5P70178 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.47□□□□□ -0.25
Six5P70178 Gm18049-201ENSMUST00000208909 581 ntBASIC13.47□□□□□ -0.25
Six5P70178 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.47□□□□□ -0.25
Six5P70178 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.47□□□□□ -0.25
Six5P70178 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.47□□□□□ -0.25
Six5P70178 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Six5P70178 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.47□□□□□ -0.25
Six5P70178 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.47□□□□□ -0.25
Six5P70178 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.47□□□□□ -0.25
Six5P70178 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Six5P70178 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six5P70178 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Six5P70178 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Six5P70178 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Six5P70178 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Six5P70178 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Six5P70178 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.46□□□□□ -0.25
Six5P70178 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
Six5P70178 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Six5P70178 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms