Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hmgb1P63158 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgb1P63158 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.84■□□□□ 0.13
Hmgb1P63158 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgb1P63158 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.84■□□□□ 0.13
Hmgb1P63158 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgb1P63158 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.83■□□□□ 0.13
Hmgb1P63158 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgb1P63158 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgb1P63158 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Gm17968-201ENSMUST00000194902 784 ntBASIC15.83■□□□□ 0.12
Hmgb1P63158 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.83■□□□□ 0.12
Hmgb1P63158 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hmgb1P63158 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgb1P63158 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Hmgb1P63158 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Gm9727-201ENSMUST00000161387 555 ntBASIC15.82■□□□□ 0.12
Hmgb1P63158 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.82■□□□□ 0.12
Hmgb1P63158 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.82■□□□□ 0.12
Hmgb1P63158 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.82■□□□□ 0.12
Hmgb1P63158 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.82■□□□□ 0.12
Hmgb1P63158 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.82■□□□□ 0.12
Hmgb1P63158 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hmgb1P63158 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgb1P63158 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.81■□□□□ 0.12
Hmgb1P63158 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb1P63158 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb1P63158 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms