Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nup43P59235 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Nup43P59235 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.6□□□□□ -0.23
Nup43P59235 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Gm5779-201ENSMUST00000218467 910 ntBASIC13.6□□□□□ -0.23
Nup43P59235 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Nup43P59235 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nup43P59235 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nup43P59235 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nup43P59235 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nup43P59235 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup43P59235 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nup43P59235 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nup43P59235 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nup43P59235 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.59□□□□□ -0.23
Nup43P59235 Gm29310-201ENSMUST00000185468 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21825-201ENSMUST00000185728 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm29109-201ENSMUST00000185895 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21896-201ENSMUST00000186520 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21873-201ENSMUST00000186728 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21794-201ENSMUST00000187056 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21880-201ENSMUST00000187275 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21826-201ENSMUST00000187451 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21198-201ENSMUST00000188393 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21749-201ENSMUST00000189343 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21901-201ENSMUST00000189568 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm29424-201ENSMUST00000189716 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm28599-201ENSMUST00000189838 694 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21867-201ENSMUST00000189917 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm29269-201ENSMUST00000190087 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21722-201ENSMUST00000190153 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm28423-201ENSMUST00000190701 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21899-201ENSMUST00000190745 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21910-201ENSMUST00000191163 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21849-201ENSMUST00000191571 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm28678-201ENSMUST00000191593 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm20910-201ENSMUST00000193268 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Gm21871-201ENSMUST00000194621 696 ntBASIC13.59□□□□□ -0.23
Nup43P59235 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Nup43P59235 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nup43P59235 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup43P59235 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nup43P59235 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nup43P59235 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup43P59235 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup43P59235 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nup43P59235 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.58□□□□□ -0.24
Nup43P59235 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.58□□□□□ -0.24
Nup43P59235 Gm29541-201ENSMUST00000191351 678 ntBASIC13.58□□□□□ -0.24
Nup43P59235 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.58□□□□□ -0.24
Nup43P59235 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.58□□□□□ -0.24
Nup43P59235 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup43P59235 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nup43P59235 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms