Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh11P55288 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdh11P55288 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Gm23935-201ENSMUST00000102303 57 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Gm24270-201ENSMUST00000102326 57 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cdh11P55288 Gm24245-201ENSMUST00000157318 57 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh11P55288 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh11P55288 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh11P55288 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.15□□□□□ -0.3
Cdh11P55288 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh11P55288 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Cdh11P55288 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh11P55288 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh11P55288 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.14□□□□□ -0.31
Cdh11P55288 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh11P55288 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh11P55288 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.14□□□□□ -0.31
Cdh11P55288 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh11P55288 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Gm25925-201ENSMUST00000158314 306 ntBASIC13.14□□□□□ -0.31
Cdh11P55288 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.14□□□□□ -0.31
Cdh11P55288 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh11P55288 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdh11P55288 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh11P55288 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh11P55288 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh11P55288 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.13□□□□□ -0.31
Cdh11P55288 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh11P55288 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.13□□□□□ -0.31
Cdh11P55288 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh11P55288 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.13□□□□□ -0.31
Cdh11P55288 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Cdh11P55288 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.13□□□□□ -0.31
Cdh11P55288 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh11P55288 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdh11P55288 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdh11P55288 Gm43767-201ENSMUST00000198933 381 ntBASIC13.13□□□□□ -0.31
Cdh11P55288 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh11P55288 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh11P55288 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms