Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.4□□□□□ -0.1
Fdft1P53798 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Fdft1P53798 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Fdft1P53798 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.39□□□□□ -0.11
Fdft1P53798 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Fdft1P53798 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Fdft1P53798 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.39□□□□□ -0.11
Fdft1P53798 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Fdft1P53798 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Fdft1P53798 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Fdft1P53798 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Fdft1P53798 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.38□□□□□ -0.11
Fdft1P53798 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Fdft1P53798 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Fdft1P53798 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.38□□□□□ -0.11
Fdft1P53798 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Matn2-206ENSMUST00000228570 2798 ntBASIC14.38□□□□□ -0.11
Fdft1P53798 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fdft1P53798 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Fdft1P53798 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.37□□□□□ -0.11
Fdft1P53798 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.37□□□□□ -0.11
Fdft1P53798 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Mir8117-201ENSMUST00000184773 107 ntBASIC14.37□□□□□ -0.11
Fdft1P53798 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Fdft1P53798 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.37□□□□□ -0.11
Fdft1P53798 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.37□□□□□ -0.11
Fdft1P53798 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms