Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44357-201ENSMUST00000195897 142 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm19658-201ENSMUST00000196231 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44367-201ENSMUST00000196836 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44350-201ENSMUST00000197197 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44390-201ENSMUST00000197533 144 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44313-201ENSMUST00000198018 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44486-201ENSMUST00000198508 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44314-201ENSMUST00000199263 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44394-201ENSMUST00000199558 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44484-201ENSMUST00000199873 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44466-201ENSMUST00000200264 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm44359-201ENSMUST00000200671 138 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Gm45167-201ENSMUST00000208007 322 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Gm9182-201ENSMUST00000217829 639 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.25□□□□□ -0.45
Hmga2P52927 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Hmga2P52927 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Hmga2P52927 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmga2P52927 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmga2P52927 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hmga2P52927 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.24□□□□□ -0.45
Hmga2P52927 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.24□□□□□ -0.45
Hmga2P52927 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Gm2272-201ENSMUST00000194903 582 ntBASIC12.24□□□□□ -0.45
Hmga2P52927 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmga2P52927 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Hmga2P52927 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hmga2P52927 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hmga2P52927 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmga2P52927 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga2P52927 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms