Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.88■□□□□ 0.13
Brca1P48754 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.88■□□□□ 0.13
Brca1P48754 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.88■□□□□ 0.13
Brca1P48754 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Brca1P48754 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.88■□□□□ 0.13
Brca1P48754 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Brca1P48754 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.88■□□□□ 0.13
Brca1P48754 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
Brca1P48754 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Brca1P48754 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Brca1P48754 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.87■□□□□ 0.13
Brca1P48754 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Brca1P48754 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Brca1P48754 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.87■□□□□ 0.13
Brca1P48754 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.87■□□□□ 0.13
Brca1P48754 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Gm4271-201ENSMUST00000174444 973 ntBASIC15.87■□□□□ 0.13
Brca1P48754 Gm19309-201ENSMUST00000218295 205 ntBASIC15.87■□□□□ 0.13
Brca1P48754 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Brca1P48754 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.87■□□□□ 0.13
Brca1P48754 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Brca1P48754 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Gm38671-201ENSMUST00000200573 130 ntBASIC15.87■□□□□ 0.13
Brca1P48754 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.87■□□□□ 0.13
Brca1P48754 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.87■□□□□ 0.13
Brca1P48754 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Brca1P48754 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Brca1P48754 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.86■□□□□ 0.13
Brca1P48754 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.86■□□□□ 0.13
Brca1P48754 Gm16570-201ENSMUST00000161951 436 ntBASIC15.86■□□□□ 0.13
Brca1P48754 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Gm27501-201ENSMUST00000183599 107 ntBASIC15.86■□□□□ 0.13
Brca1P48754 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.86■□□□□ 0.13
Brca1P48754 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.86■□□□□ 0.13
Brca1P48754 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Brca1P48754 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.86■□□□□ 0.13
Brca1P48754 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Brca1P48754 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.85■□□□□ 0.13
Brca1P48754 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.85■□□□□ 0.13
Brca1P48754 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Gm12203-201ENSMUST00000118235 598 ntBASIC15.85■□□□□ 0.13
Brca1P48754 Gm12209-201ENSMUST00000120089 596 ntBASIC15.85■□□□□ 0.13
Brca1P48754 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.85■□□□□ 0.13
Brca1P48754 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.85■□□□□ 0.13
Brca1P48754 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.85■□□□□ 0.13
Brca1P48754 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Gm29608-201ENSMUST00000190444 463 ntBASIC15.85■□□□□ 0.13
Brca1P48754 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.85■□□□□ 0.13
Brca1P48754 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.85■□□□□ 0.13
Brca1P48754 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Brca1P48754 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Brca1P48754 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms