Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps4bP46467 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.63□□□□□ -0.07
Vps4bP46467 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.63□□□□□ -0.07
Vps4bP46467 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vps4bP46467 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vps4bP46467 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Vps4bP46467 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Gm27301-201ENSMUST00000184012 127 ntBASIC14.62□□□□□ -0.07
Vps4bP46467 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.62□□□□□ -0.07
Vps4bP46467 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Vps4bP46467 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.62□□□□□ -0.07
Vps4bP46467 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps4bP46467 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps4bP46467 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Gm14494-201ENSMUST00000118786 435 ntBASIC14.61□□□□□ -0.07
Vps4bP46467 Gm14140-201ENSMUST00000119999 995 ntBASIC14.61□□□□□ -0.07
Vps4bP46467 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vps4bP46467 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.61□□□□□ -0.07
Vps4bP46467 Gm45098-201ENSMUST00000207179 657 ntBASIC14.61□□□□□ -0.07
Vps4bP46467 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps4bP46467 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps4bP46467 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vps4bP46467 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Vps4bP46467 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps4bP46467 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps4bP46467 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps4bP46467 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Vps4bP46467 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vps4bP46467 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps4bP46467 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps4bP46467 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vps4bP46467 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps4bP46467 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms