Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.62□□□□□ -0.23
Nkx2-6P43688 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-6P43688 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 AA619741-201ENSMUST00000195095 646 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Gm46209-201ENSMUST00000217912 553 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.61□□□□□ -0.23
Nkx2-6P43688 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-6P43688 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm4875-201ENSMUST00000118257 786 ntBASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm11424-201ENSMUST00000121929 829 ntBASIC13.6□□□□□ -0.23
Nkx2-6P43688 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm9726-201ENSMUST00000180321 678 ntBASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm9229-201ENSMUST00000222777 126 ntBASIC13.6□□□□□ -0.23
Nkx2-6P43688 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-6P43688 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-6P43688 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms