Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Gm18246-201ENSMUST00000221023 728 ntBASIC11.9□□□□□ -0.5
Hist1h1aP43275 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hist1h1aP43275 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.9□□□□□ -0.5
Hist1h1aP43275 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hist1h1aP43275 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Hist1h1aP43275 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hist1h1aP43275 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Hist1h1aP43275 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hist1h1aP43275 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm45167-201ENSMUST00000208007 322 ntBASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.89□□□□□ -0.51
Hist1h1aP43275 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.89□□□□□ -0.51
Hist1h1aP43275 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist1h1aP43275 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hist1h1aP43275 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.88□□□□□ -0.51
Hist1h1aP43275 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hist1h1aP43275 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist1h1aP43275 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms