Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm15370-201ENSMUST00000117158 253 ntBASIC15.02□□□□□ -0.01
HttP42859 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.02□□□□□ -0.01
HttP42859 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.02□□□□□ -0.01
HttP42859 Gm2260-201ENSMUST00000184965 657 ntBASIC15.02□□□□□ -0.01
HttP42859 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.02□□□□□ -0.01
HttP42859 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.02□□□□□ -0.01
HttP42859 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HttP42859 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HttP42859 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HttP42859 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HttP42859 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HttP42859 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
HttP42859 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HttP42859 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HttP42859 Gm23200-201ENSMUST00000104379 132 ntBASIC15.01□□□□□ -0.01
HttP42859 Gm25668-201ENSMUST00000157700 129 ntBASIC15.01□□□□□ -0.01
HttP42859 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.01□□□□□ -0.01
HttP42859 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.01□□□□□ -0.01
HttP42859 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.01□□□□□ -0.01
HttP42859 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.01□□□□□ -0.01
HttP42859 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Gm12566-201ENSMUST00000121479 359 ntBASIC15.01□□□□□ -0.01
HttP42859 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.01□□□□□ -0.01
HttP42859 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.01□□□□□ -0.01
HttP42859 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.01□□□□□ -0.01
HttP42859 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.01□□□□□ -0.01
HttP42859 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.01□□□□□ -0.01
HttP42859 Gm37922-201ENSMUST00000195596 455 ntBASIC15.01□□□□□ -0.01
HttP42859 Morn2-202ENSMUST00000227729 656 ntBASIC15.01□□□□□ -0.01
HttP42859 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HttP42859 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15□□□□□ -0.01
HttP42859 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Gm7467-201ENSMUST00000185173 652 ntBASIC15□□□□□ -0.01
HttP42859 Gm37835-201ENSMUST00000193305 361 ntBASIC15□□□□□ -0.01
HttP42859 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HttP42859 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HttP42859 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Gm7857-201ENSMUST00000117957 358 ntBASIC15□□□□□ -0.01
HttP42859 Gm11557-201ENSMUST00000120200 1008 ntBASIC15□□□□□ -0.01
HttP42859 Gm8927-201ENSMUST00000181978 981 ntBASIC15□□□□□ -0.01
HttP42859 Gm37489-201ENSMUST00000191883 159 ntBASIC15□□□□□ -0.01
HttP42859 Gm44126-201ENSMUST00000204831 514 ntBASIC15□□□□□ -0.01
HttP42859 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HttP42859 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15□□□□□ -0.01
HttP42859 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15□□□□□ -0.01
HttP42859 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HttP42859 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Gm11628-201ENSMUST00000117568 171 ntBASIC14.99□□□□□ -0.01
HttP42859 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.99□□□□□ -0.01
HttP42859 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.99□□□□□ -0.01
HttP42859 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.99□□□□□ -0.01
HttP42859 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.99□□□□□ -0.01
HttP42859 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.99□□□□□ -0.01
HttP42859 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.99□□□□□ -0.01
HttP42859 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HttP42859 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms