Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Kdm5cP41230 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Kdm5cP41230 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Kdm5cP41230 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC20.51■□□□□ 0.87
Kdm5cP41230 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Kdm5cP41230 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Kdm5cP41230 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm5cP41230 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Kdm5cP41230 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Kdm5cP41230 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Gm12846-201ENSMUST00000120431 1373 ntBASIC20.5■□□□□ 0.87
Kdm5cP41230 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC20.5■□□□□ 0.87
Kdm5cP41230 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.5■□□□□ 0.87
Kdm5cP41230 Gm13342-201ENSMUST00000121055 207 ntBASIC20.5■□□□□ 0.87
Kdm5cP41230 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Kdm5cP41230 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm5cP41230 Gm14451-201ENSMUST00000121581 1542 ntBASIC20.49■□□□□ 0.87
Kdm5cP41230 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Kdm5cP41230 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Gm15808-201ENSMUST00000119046 604 ntBASIC20.49■□□□□ 0.87
Kdm5cP41230 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Kdm5cP41230 Gm29608-201ENSMUST00000190444 463 ntBASIC20.49■□□□□ 0.87
Kdm5cP41230 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC20.49■□□□□ 0.87
Kdm5cP41230 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm5cP41230 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC20.49■□□□□ 0.87
Kdm5cP41230 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Kdm5cP41230 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC20.49■□□□□ 0.87
Kdm5cP41230 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Gm6203-201ENSMUST00000209575 1342 ntBASIC20.48■□□□□ 0.87
Kdm5cP41230 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.48■□□□□ 0.87
Kdm5cP41230 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm5cP41230 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC20.47■□□□□ 0.87
Kdm5cP41230 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Gm5850-201ENSMUST00000192923 1206 ntBASIC20.47■□□□□ 0.87
Kdm5cP41230 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Kdm5cP41230 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Kdm5cP41230 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Kdm5cP41230 Gm8706-201ENSMUST00000197372 1491 ntBASIC20.47■□□□□ 0.87
Kdm5cP41230 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Kdm5cP41230 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm5cP41230 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms