Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.55□□□□□ -0.24
Sox6P40645 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Sox6P40645 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.54□□□□□ -0.24
Sox6P40645 Gm27300-201ENSMUST00000184085 97 ntBASIC13.54□□□□□ -0.24
Sox6P40645 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Gm27335-201ENSMUST00000184758 97 ntBASIC13.54□□□□□ -0.24
Sox6P40645 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox6P40645 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox6P40645 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox6P40645 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox6P40645 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox6P40645 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.54□□□□□ -0.24
Sox6P40645 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Sox6P40645 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox6P40645 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox6P40645 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox6P40645 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Sox6P40645 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox6P40645 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Sox6P40645 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox6P40645 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Gm43514-201ENSMUST00000198852 424 ntBASIC13.53□□□□□ -0.24
Sox6P40645 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.53□□□□□ -0.24
Sox6P40645 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox6P40645 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Sox6P40645 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sox6P40645 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox6P40645 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox6P40645 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.52□□□□□ -0.24
Sox6P40645 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox6P40645 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.52□□□□□ -0.24
Sox6P40645 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox6P40645 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox6P40645 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox6P40645 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox6P40645 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox6P40645 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.52□□□□□ -0.25
Sox6P40645 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms