Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm15236-201ENSMUST00000117309 379 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm13612-201ENSMUST00000119276 390 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm6983-201ENSMUST00000214912 628 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Cxcl12P40224 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.72□□□□□ -0.05
Cxcl12P40224 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl12P40224 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.71□□□□□ -0.05
Cxcl12P40224 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cxcl12P40224 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cxcl12P40224 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cxcl12P40224 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Cxcl12P40224 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl12P40224 Gm38266-201ENSMUST00000194931 421 ntBASIC14.71□□□□□ -0.05
Cxcl12P40224 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.71□□□□□ -0.05
Cxcl12P40224 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.71□□□□□ -0.05
Cxcl12P40224 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.71□□□□□ -0.05
Cxcl12P40224 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cxcl12P40224 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cxcl12P40224 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cxcl12P40224 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cxcl12P40224 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm13689-201ENSMUST00000119360 685 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm22331-201ENSMUST00000158066 136 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm18056-201ENSMUST00000207670 568 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm18061-201ENSMUST00000208350 562 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm18063-201ENSMUST00000208529 568 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Gm18052-201ENSMUST00000208750 559 ntBASIC14.7□□□□□ -0.06
Cxcl12P40224 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cxcl12P40224 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cxcl12P40224 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Cxcl12P40224 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Cxcl12P40224 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.69□□□□□ -0.06
Cxcl12P40224 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cxcl12P40224 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.69□□□□□ -0.06
Cxcl12P40224 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms