Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rab5cP35278 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rab5cP35278 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rab5cP35278 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rab5cP35278 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rab5cP35278 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rab5cP35278 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.72□□□□□ -0.53
Rab5cP35278 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.72□□□□□ -0.53
Rab5cP35278 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.72□□□□□ -0.53
Rab5cP35278 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Rab5cP35278 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.72□□□□□ -0.53
Rab5cP35278 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.72□□□□□ -0.53
Rab5cP35278 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.72□□□□□ -0.53
Rab5cP35278 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rab5cP35278 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Rab5cP35278 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Rab5cP35278 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.71□□□□□ -0.53
Rab5cP35278 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.71□□□□□ -0.53
Rab5cP35278 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.71□□□□□ -0.53
Rab5cP35278 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
Rab5cP35278 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Rab5cP35278 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rab5cP35278 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Rab5cP35278 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rab5cP35278 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.71□□□□□ -0.53
Rab5cP35278 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rab5cP35278 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.71□□□□□ -0.53
Rab5cP35278 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.71□□□□□ -0.54
Rab5cP35278 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rab5cP35278 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rab5cP35278 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rab5cP35278 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rab5cP35278 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rab5cP35278 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.7□□□□□ -0.54
Rab5cP35278 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.7□□□□□ -0.54
Rab5cP35278 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rab5cP35278 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rab5cP35278 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.7□□□□□ -0.54
Rab5cP35278 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rab5cP35278 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms