Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.31□□□□□ -0.28
Nedd8P29595 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nedd8P29595 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nedd8P29595 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.3□□□□□ -0.28
Nedd8P29595 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.3□□□□□ -0.28
Nedd8P29595 Gm18622-201ENSMUST00000219361 595 ntBASIC13.3□□□□□ -0.28
Nedd8P29595 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.3□□□□□ -0.28
Nedd8P29595 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nedd8P29595 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nedd8P29595 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nedd8P29595 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nedd8P29595 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.29□□□□□ -0.28
Nedd8P29595 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Nedd8P29595 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nedd8P29595 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nedd8P29595 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.29□□□□□ -0.28
Nedd8P29595 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nedd8P29595 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nedd8P29595 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nedd8P29595 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Nedd8P29595 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nedd8P29595 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Nedd8P29595 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.28□□□□□ -0.28
Nedd8P29595 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.28□□□□□ -0.28
Nedd8P29595 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nedd8P29595 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nedd8P29595 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nedd8P29595 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms