Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.46□□□□□ -0.09
RxrbP28704 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.46□□□□□ -0.09
RxrbP28704 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.46□□□□□ -0.09
RxrbP28704 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.46□□□□□ -0.09
RxrbP28704 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RxrbP28704 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RxrbP28704 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.46□□□□□ -0.09
RxrbP28704 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RxrbP28704 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RxrbP28704 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RxrbP28704 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RxrbP28704 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.46□□□□□ -0.09
RxrbP28704 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
RxrbP28704 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RxrbP28704 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RxrbP28704 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.45□□□□□ -0.1
RxrbP28704 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
RxrbP28704 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.45□□□□□ -0.1
RxrbP28704 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.45□□□□□ -0.1
RxrbP28704 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RxrbP28704 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.45□□□□□ -0.1
RxrbP28704 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.45□□□□□ -0.1
RxrbP28704 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RxrbP28704 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RxrbP28704 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RxrbP28704 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.45□□□□□ -0.1
RxrbP28704 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RxrbP28704 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RxrbP28704 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RxrbP28704 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.44□□□□□ -0.1
RxrbP28704 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.44□□□□□ -0.1
RxrbP28704 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RxrbP28704 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.44□□□□□ -0.1
RxrbP28704 Gm5682-201ENSMUST00000173402 505 ntBASIC14.44□□□□□ -0.1
RxrbP28704 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.44□□□□□ -0.1
RxrbP28704 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.44□□□□□ -0.1
RxrbP28704 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.44□□□□□ -0.1
RxrbP28704 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RxrbP28704 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RxrbP28704 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.44□□□□□ -0.1
RxrbP28704 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RxrbP28704 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms