Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.36□□□□□ -0.11
Gja4P28235 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gja4P28235 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.36□□□□□ -0.11
Gja4P28235 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gja4P28235 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Gja4P28235 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Gja4P28235 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.35□□□□□ -0.11
Gja4P28235 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.35□□□□□ -0.11
Gja4P28235 Gm12341-201ENSMUST00000119724 503 ntBASIC14.35□□□□□ -0.11
Gja4P28235 Gm15806-201ENSMUST00000120696 955 ntBASIC14.35□□□□□ -0.11
Gja4P28235 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.35□□□□□ -0.11
Gja4P28235 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.35□□□□□ -0.11
Gja4P28235 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gja4P28235 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gja4P28235 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.35□□□□□ -0.11
Gja4P28235 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
Gja4P28235 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Gja4P28235 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gja4P28235 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.35□□□□□ -0.11
Gja4P28235 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gja4P28235 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Gja4P28235 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.34□□□□□ -0.11
Gja4P28235 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gja4P28235 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gja4P28235 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Gja4P28235 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Gja4P28235 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gja4P28235 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.34□□□□□ -0.11
Gja4P28235 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.34□□□□□ -0.11
Gja4P28235 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.34□□□□□ -0.11
Gja4P28235 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.34□□□□□ -0.11
Gja4P28235 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Gja4P28235 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.34□□□□□ -0.11
Gja4P28235 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.34□□□□□ -0.11
Gja4P28235 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gja4P28235 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gja4P28235 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gja4P28235 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gja4P28235 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gja4P28235 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.33□□□□□ -0.12
Gja4P28235 Gm13829-201ENSMUST00000119600 138 ntBASIC14.33□□□□□ -0.12
Gja4P28235 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.33□□□□□ -0.12
Gja4P28235 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.33□□□□□ -0.12
Gja4P28235 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Gm4804-201ENSMUST00000182234 999 ntBASIC14.33□□□□□ -0.12
Gja4P28235 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.33□□□□□ -0.12
Gja4P28235 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.33□□□□□ -0.12
Gja4P28235 Gm5279-201ENSMUST00000199575 745 ntBASIC14.33□□□□□ -0.12
Gja4P28235 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gja4P28235 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gja4P28235 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gja4P28235 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gja4P28235 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gja4P28235 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gja4P28235 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gja4P28235 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gja4P28235 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gja4P28235 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gja4P28235 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gja4P28235 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms