Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afxP27661 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afxP27661 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
H2afxP27661 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afxP27661 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
H2afxP27661 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afxP27661 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
H2afxP27661 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.03■□□□□ -0
H2afxP27661 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.03■□□□□ -0
H2afxP27661 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Gm13464-201ENSMUST00000119418 935 ntBASIC15.03■□□□□ -0
H2afxP27661 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.03■□□□□ -0
H2afxP27661 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.03■□□□□ -0
H2afxP27661 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
H2afxP27661 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H2afxP27661 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.03■□□□□ -0
H2afxP27661 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H2afxP27661 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
H2afxP27661 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afxP27661 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.02■□□□□ -0
H2afxP27661 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.02■□□□□ -0
H2afxP27661 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Gm12497-201ENSMUST00000138778 237 ntBASIC15.02■□□□□ -0
H2afxP27661 Gm10653-202ENSMUST00000139570 835 ntBASIC15.02■□□□□ -0
H2afxP27661 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.02■□□□□ -0
H2afxP27661 Gm6623-201ENSMUST00000173570 544 ntBASIC15.02■□□□□ -0
H2afxP27661 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.02■□□□□ -0
H2afxP27661 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afxP27661 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.02□□□□□ -0.01
H2afxP27661 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
H2afxP27661 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
H2afxP27661 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afxP27661 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H2afxP27661 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.01□□□□□ -0.01
H2afxP27661 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.01□□□□□ -0.01
H2afxP27661 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.01□□□□□ -0.01
H2afxP27661 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.01□□□□□ -0.01
H2afxP27661 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.01□□□□□ -0.01
H2afxP27661 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H2afxP27661 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.01□□□□□ -0.01
H2afxP27661 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
H2afxP27661 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
H2afxP27661 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.01□□□□□ -0.01
H2afxP27661 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afxP27661 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms